Golm Metabolome Database

GMD reference mass spectrum
profile of a single metabolite across replicates of different experiments
profile of all metabolites in a single experiments
relative metabolite concentrations in the replica groups of a single experiment

The Golm Metabolome Database (GMD)[1][2][3][4] is a gas chromatography (GC) – mass spectrometry (MS) reference library dedicated to metabolite profiling experiments and comprises mass spectral and retention index (RI) information for non-annotated mass spectral tags (MSTs, mass spectral information with retention time attached indices) together with data of a multitude of already identified metabolites and reference substances. The GMD is hosted at the Max Planck Institute of Molecular Plant Physiology in Golm district of Potsdam, Germany.

  1. ^ Hummel, J.; Strehmel, N.; Bölling, C.; Schmidt, S.; Walther, D.; Kopka, J. (2013). "Mass Spectral Search and Analysis Using the Golm Metabolome Database". The Handbook of Plant Metabolomics. p. 321. doi:10.1002/9783527669882.ch18. ISBN 9783527669882.
  2. ^ Hummel, Jan; Selbig, Joachim; Walther, Dirk; Kopka, Joachim (2007). "The Golm Metabolome Database: a database for GC-MS based metabolite profiling". In Nielsen, John; Jewett (eds.). Metabolomics. Springer Berlin Heidelberg. pp. 75–96. doi:10.1007/4735_2007_0229. ISBN 978-3-540-74719-2.
  3. ^ Schauer N, Steinhauser D, Strelkov S, Schomburg D, Allison G, Moritz T, Lundgren K, Roessner-Tunali U, Forbes MG, Willmitzer L, Fernie AR, Kopka J (2005). "GC-MS libraries for the rapid identification of metabolites in complex biological samples". FEBS Letters. 579 (6): 1332–1337. doi:10.1016/j.febslet.2005.01.029. PMID 15733837.
  4. ^ Kopka J, Schauer N, Krueger S, Birkemeyer C, Usadel B, Bergmuller E, Dormann P, Weckwerth W, Gibon Y, Stitt M, Willmitzer L, Fernie AR, Steinhauser D (2005). "GMD@CSB.DB: the Golm Metabolome Database". Bioinformatics. 21 (8): 1635–1638. doi:10.1093/bioinformatics/bti236. hdl:20.500.11850/33179. PMID 15613389.

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